| Program name | Description | 
|---|---|
| charge | Draw a protein charge plot | 
| hmoment | Calculate and plot hydrophobic moment for protein sequence(s) | 
| iep | Calculate the isoelectric point of proteins | 
| octanol | Draw a White-Wimley protein hydropathy plot | 
| pepinfo | Plot amino acid properties of a protein sequence in parallel | 
| pepstats | Calculate statistics of protein properties | 
| pepwindow | Draw a hydropathy plot for a protein sequence | 
| pepwindowall | Draw Kyte-Doolittle hydropathy plot for a protein alignment |