|   | PROTEIN MOTIFS | 
Protein motif searches
| Program name | Description | 
|---|---|
| antigenic | Find antigenic sites in proteins | 
| epestfind | Find PEST motifs as potential proteolytic cleavage sites | 
| fuzzpro | Search for patterns in protein sequences | 
| fuzztran | Search for patterns in protein sequences (translated) | 
| patmatdb | Search protein sequences with a sequence motif | 
| patmatmotifs | Scan a protein sequence with motifs from the PROSITE database | 
| preg | Regular expression search of protein sequence(s) | 
| pscan | Scan protein sequence(s) with fingerprints from the PRINTS database | 
| sigcleave | Report on signal cleavage sites in a protein sequence | 
| elipop | Predict lipoproteins | 
| eiprscan | Motif detection | 
| omeme | Motif detection | 
| emast | Motif detection | 
| ememe | Multiple EM for motif elicitation | 
| ememetext | Multiple EM for motif elicitation, text file only |