|   | cacheensembl | 
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| % cacheensembl -servername ensembl -cachefile ~/.embossdata/qatests.server.ensembl -auto ailuropoda_melanoleuca ailuropoda_melanoleuca_otherfeatures anolis_carolinensis anolis_carolinensis_otherfeatures bos_taurus bos_taurus_otherfeatures bos_taurus_variation bos_taurus_funcgen caenorhabditis_elegans caenorhabditis_elegans_funcgen callithrix_jacchus callithrix_jacchus_otherfeatures canis_familiaris canis_familiaris_otherfeatures canis_familiaris_variation canis_familiaris_funcgen cavia_porcellus cavia_porcellus_otherfeatures choloepus_hoffmanni ciona_intestinalis ciona_intestinalis_otherfeatures ciona_intestinalis_funcgen ciona_savignyi ciona_savignyi_otherfeatures danio_rerio danio_rerio_vega danio_rerio_otherfeatures danio_rerio_variation danio_rerio_funcgen dasypus_novemcinctus default_compara default_ontology dipodomys_ordii drosophila_melanogaster drosophila_melanogaster_otherfeatures drosophila_melanogaster_variation drosophila_melanogaster_funcgen echinops_telfairi equus_caballus equus_caballus_otherfeatures equus_caballus_variation erinaceus_europaeus felis_catus felis_catus_variation gadus_morhua gallus_gallus gallus_gallus_otherfeatures gallus_gallus_variation gallus_gallus_funcgen gasterosteus_aculeatus gasterosteus_aculeatus_otherfeatures gorilla_gorilla gorilla_gorilla_otherfeatures homo_sapiens homo_sapiens_vega homo_sapiens_otherfeatures homo_sapiens_cdna homo_sapiens_variation homo_sapiens_funcgen ictidomys_tridecemlineatus ictidomys_tridecemlineatus_otherfeatures latimeria_chalumnae latimeria_chalumnae_otherfeatures loxodonta_africana macaca_mulatta macaca_mulatta_otherfeatures macaca_mulatta_variation macaca_mulatta_funcgen macropus_eugenii meleagris_gallopavo meleagris_gallopavo_otherfeatures microcebus_murinus monodelphis_domestica monodelphis_domestica_variation mus_musculus mus_musculus_vega mus_musculus_otherfeatures mus_musculus_cdna mus_musculus_variation mus_musculus_funcgen myotis_lucifugus myotis_lucifugus_otherfeatures nomascus_leucogenys nomascus_leucogenys_otherfeatures ochotona_princeps oreochromis_niloticus oreochromis_niloticus_otherfeatures ornithorhynchus_anatinus ornithorhynchus_anatinus_otherfeatures ornithorhynchus_anatinus_variation ornithorhynchus_anatinus_funcgen oryctolagus_cuniculus oryctolagus_cuniculus_otherfeatures oryzias_latipes oryzias_latipes_otherfeatures otolemur_garnettii otolemur_garnettii_otherfeatures pan_troglodytes pan_troglodytes_otherfeatures pan_troglodytes_variation pan_troglodytes_funcgen pelodiscus_sinensis pelodiscus_sinensis_otherfeatures petromyzon_marinus petromyzon_marinus_otherfeatures pongo_abelii pongo_abelii_otherfeatures pongo_abelii_variation procavia_capensis pteropus_vampyrus rattus_norvegicus rattus_norvegicus_otherfeatures rattus_norvegicus_variation rattus_norvegicus_funcgen saccharomyces_cerevisiae saccharomyces_cerevisiae_otherfeatures saccharomyces_cerevisiae_variation saccharomyces_cerevisiae_funcgen sarcophilus_harrisii sarcophilus_harrisii_otherfeatures sorex_araneus sus_scrofa sus_scrofa_otherfeatures sus_scrofa_variation sus_scrofa_funcgen taeniopygia_guttata taeniopygia_guttata_otherfeatures taeniopygia_guttata_variation takifugu_rubripes takifugu_rubripes_otherfeatures tarsius_syrichta tetraodon_nigroviridis tetraodon_nigroviridis_otherfeatures tetraodon_nigroviridis_variation tupaia_belangeri tursiops_truncatus vicugna_pacos xenopus_tropicalis xenopus_tropicalis_otherfeatures xenopus_tropicalis_funcgen | 
Go to the output files for this example
| 
Generate server cache file for an Ensembl server
Version: EMBOSS:6.6.0.0
   Standard (Mandatory) qualifiers:
   -servername         string     Server name (Any string)
  [-cachefile]         outfile    [server.$(servername)] Server cache output
                                  file
   Additional (Optional) qualifiers:
   -outfile            outfile    [stdout] Output file name
   Advanced (Unprompted) qualifiers: (none)
   Associated qualifiers:
   "-outfile" associated qualifiers
   -odirectory         string     Output directory
   "-cachefile" associated qualifiers
   -odirectory1        string     Output directory
   General qualifiers:
   -auto               boolean    Turn off prompts
   -stdout             boolean    Write first file to standard output
   -filter             boolean    Read first file from standard input, write
                                  first file to standard output
   -options            boolean    Prompt for standard and additional values
   -debug              boolean    Write debug output to program.dbg
   -verbose            boolean    Report some/full command line options
   -help               boolean    Report command line options and exit. More
                                  information on associated and general
                                  qualifiers can be found with -help -verbose
   -warning            boolean    Report warnings
   -error              boolean    Report errors
   -fatal              boolean    Report fatal errors
   -die                boolean    Report dying program messages
   -version            boolean    Report version number and exit
 | 
| Qualifier | Type | Description | Allowed values | Default | 
|---|---|---|---|---|
| Standard (Mandatory) qualifiers | ||||
| -servername | string | Server name | Any string | |
| [-cachefile] (Parameter 1) | outfile | Server cache output file | Output file | server.$(servername) | 
| Additional (Optional) qualifiers | ||||
| -outfile | outfile | Output file name | Output file | stdout | 
| Advanced (Unprompted) qualifiers | ||||
| (none) | ||||
| Associated qualifiers | ||||
| "-outfile" associated outfile qualifiers | ||||
| -odirectory | string | Output directory | Any string | |
| "-cachefile" associated outfile qualifiers | ||||
| -odirectory1 -odirectory_cachefile | string | Output directory | Any string | |
| General qualifiers | ||||
| -auto | boolean | Turn off prompts | Boolean value Yes/No | N | 
| -stdout | boolean | Write first file to standard output | Boolean value Yes/No | N | 
| -filter | boolean | Read first file from standard input, write first file to standard output | Boolean value Yes/No | N | 
| -options | boolean | Prompt for standard and additional values | Boolean value Yes/No | N | 
| -debug | boolean | Write debug output to program.dbg | Boolean value Yes/No | N | 
| -verbose | boolean | Report some/full command line options | Boolean value Yes/No | Y | 
| -help | boolean | Report command line options and exit. More information on associated and general qualifiers can be found with -help -verbose | Boolean value Yes/No | N | 
| -warning | boolean | Report warnings | Boolean value Yes/No | Y | 
| -error | boolean | Report errors | Boolean value Yes/No | Y | 
| -fatal | boolean | Report fatal errors | Boolean value Yes/No | Y | 
| -die | boolean | Report dying program messages | Boolean value Yes/No | Y | 
| -version | boolean | Report version number and exit | Boolean value Yes/No | N | 
| # /homes/user/.embossdata/qatests.server.ensembl 2013-07-15 12:00:00 # Automatically generated by cacheensembl for server 'ensembl'. DBNAME ailuropoda_melanoleuca [ dbalias: "ailuropoda_melanoleuca_core_68_1" release: "68" server: "ensembl" special: "SpeciesPrefix=ENSAME;" ] ALIAS 9646 ailuropoda_melanoleuca ALIAS ailmel ailuropoda_melanoleuca ALIAS ailmel1 ailuropoda_melanoleuca ALIAS amel ailuropoda_melanoleuca ALIAS amelanoleuca ailuropoda_melanoleuca ALIAS panda ailuropoda_melanoleuca DBNAME ailuropoda_melanoleuca_otherfeatures [ dbalias: "ailuropoda_melanoleuca_otherfeatures_68_1" release: "68" server: "ensembl" special: "SpeciesPrefix=ENSAME;" ] DBNAME anolis_carolinensis [ dbalias: "anolis_carolinensis_core_68_2" release: "68" server: "ensembl" special: "SpeciesPrefix=ENSACA;" ] ALIAS 28377 anolis_carolinensis ALIAS acar anolis_carolinensis ALIAS acarolinensis anolis_carolinensis ALIAS anocar anolis_carolinensis ALIAS anolis anolis_carolinensis ALIAS anoliscarolinensis anolis_carolinensis ALIAS anolis_lizard anolis_carolinensis DBNAME anolis_carolinensis_otherfeatures [ dbalias: "anolis_carolinensis_otherfeatures_68_2" release: "68" server: "ensembl" special: "SpeciesPrefix=ENSACA;" ] DBNAME bos_taurus [ dbalias: "bos_taurus_core_68_31" release: "68" server: "ensembl" [Part of this file has been deleted for brevity] ] ALIAS 9739 tursiops_truncatus ALIAS dolphin tursiops_truncatus ALIAS ttru tursiops_truncatus ALIAS ttruncatus tursiops_truncatus ALIAS tursiopstruncatus tursiops_truncatus ALIAS turtru tursiops_truncatus ALIAS turtru1 tursiops_truncatus DBNAME vicugna_pacos [ dbalias: "vicugna_pacos_core_68_1" release: "68" server: "ensembl" special: "SpeciesPrefix=ENSVPA;" ] ALIAS 30538 vicugna_pacos ALIAS alpaca vicugna_pacos ALIAS vicpac vicugna_pacos ALIAS vicpac1 vicugna_pacos ALIAS vicugnapacos vicugna_pacos ALIAS vpac vicugna_pacos ALIAS vpacos vicugna_pacos DBNAME xenopus_tropicalis [ dbalias: "xenopus_tropicalis_core_68_42" release: "68" server: "ensembl" special: "SpeciesPrefix=ENSXET;" ] ALIAS 8364 xenopus_tropicalis ALIAS xenopus xenopus_tropicalis ALIAS xentro xenopus_tropicalis ALIAS xtro xenopus_tropicalis ALIAS xtropicalis xenopus_tropicalis DBNAME xenopus_tropicalis_otherfeatures [ dbalias: "xenopus_tropicalis_otherfeatures_68_42" release: "68" server: "ensembl" special: "SpeciesPrefix=ENSXET;" ] DBNAME xenopus_tropicalis_funcgen [ dbalias: "xenopus_tropicalis_funcgen_68_42" release: "68" server: "ensembl" ] | 
| Program name | Description | 
|---|---|
| cachedas | Generate server cache file for DAS servers or for the DAS registry | 
| cachedbfetch | Generate server cache file for Dbfetch/WSDbfetch data sources | 
| cacheebeyesearch | Generate server cache file for EB-eye search domains | 
| dbtell | Display information about a public database | 
| servertell | Display information about a public server | 
| showdb | Display information on configured databases | 
| showserver | Display information on configured servers | 
Please report all bugs to the EMBOSS bug team (emboss-bug © emboss.open-bio.org) not to the original author.